Index Catalog // DataCORE

Genes of Anopheles funestus, mosquito reconstructed with EvidentialGene

Description:: The evigene_mosquito_anofun2016 archive package contains a complete, reconstructed gene set of Anopheles funestus, mosquito, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Title:: Genes of Anopheles funestus, mosquito reconstructed with EvidentialGene

CentOS 6 (6.7) Development

Description:: Initial Jetstream Featured image. Based on Centos 6 Cloud 1601 Image, Development tools added, Patched up to date as of 3/16/16
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Title:: CentOS 6 (6.7) Development

Vortex II Forecast Data - forecast_20100528170000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100528170000Z_run001

Vortex II Forecast Data - forecast_20100516170000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100516170000Z_run001

Vortex II Forecast Data - forecast_20100614150000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100614150000Z_run001

Vortex II Forecast Data - forecast_20100606160000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100606160000Z_run001

Vortex II Forecast Data - forecast_20100607120000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100607120000Z_run001

Vortex II Forecast Data - forecast_20100601160000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100601160000Z_run001

Vortex II Forecast Data - forecast_20100524150000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100524150000Z_run001

Genes of Daphnia pulex reconstructed with EvidentialGene

Description:: The evigene_daphnia_pulex2017 archive package contains a complete, reconstructed gene set of Daphnia pulex, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Title:: Genes of Daphnia pulex reconstructed with EvidentialGene

PEARC17 R Tutorial

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Title:: PEARC17 R Tutorial

A comprehensive pipeline for translational top-down proteomics from a single blood draw

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Title:: A comprehensive pipeline for translational top-down proteomics from a single blood draw

Vortex II Forecast Data - forecast_20100502160000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100502160000Z_run001

Vortex II Forecast Data - forecast_20100611140000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100611140000Z_run001

Vortex II Forecast Data - forecast_20100505150000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100505150000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100503140000Z_run001

Vortex II Forecast Data - forecast_20100517120000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100517120000Z_run001

Vortex II Forecast Data - forecast_20100606140000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100606140000Z_run001

Vortex II Forecast Data - forecast_20100502140000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100502140000Z_run001

Genes of Daphnia magna reconstructed with EvidentialGene

Description:: The evigene_daphnia_magna2014 archive package contains a complete, reconstructed gene set of Daphnia magna, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Title:: Genes of Daphnia magna reconstructed with EvidentialGene

Vortex II Forecast Data - forecast_20100528130000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100528130000Z_run001

Vortex II Forecast Data - forecast_20100614160000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100614160000Z_run001

Vortex II Forecast Data - forecast_20100526120000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100526120000Z_run001

Vortex II Forecast Data - forecast_20100525160000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100525160000Z_run001

Vortex II Forecast Data - forecast_20100604170000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100604170000Z_run001

Vortex II Forecast Data - forecast_20100518140000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100518140000Z_run001

Optimizing capillary electrophoresis for top-down proteomics of 30-80 kDa proteins.

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Title:: Optimizing capillary electrophoresis for top-down proteomics of 30-80 kDa proteins.

Genes of Penaeus monodon, tiger shrimp reconstructed with EvidentialGene

Description:: The evigene_shrimp_penamon2013 archive package contains a complete, reconstructed gene set of Penaeus monodon, tiger shrimp, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Title:: Genes of Penaeus monodon, tiger shrimp reconstructed with EvidentialGene

Test of Publishing a Jetstream VM

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Title:: Test of Publishing a Jetstream VM

Vortex II Forecast Data - forecast_20100510130000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100510130000Z_run001

Bioinformatics Analysis of Top-Down Mass Spectrometry Data with ProSight Lite

Description:: Accompanying dataset to the protocol published in Methods in Molecular Biology. Click on the PURL link below in the "External Files" section to download the dataset.
Citation to related publication:
Title:: Bioinformatics Analysis of Top-Down Mass Spectrometry Data with ProSight Lite

Genes of Anopheles albimanus, mosquito reconstructed with EvidentialGene

Description:: The evigene_mosquito_anoalb2016 archive package contains a complete, reconstructed gene set of Anopheles albimanus, mosquito, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Title:: Genes of Anopheles albimanus, mosquito reconstructed with EvidentialGene

Ubuntu-Docker-Dev-Lake-Problem

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Title:: Ubuntu-Docker-Dev-Lake-Problem

Vortex II Forecast Data - forecast_20100612130000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100612130000Z_run001

Vortex II Forecast Data - forecast_20100523150000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100523150000Z_run001

Genes of the Pig, Sus scrofa, reconstructed with EvidentialGene

Description:: The evigene_pig2018 download contains a complete, reconstructed gene set of model animal Pig, Sus scrofa, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Title:: Genes of the Pig, Sus scrofa, reconstructed with EvidentialGene

Vortex II Forecast Data - forecast_20100531150000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100531150000Z_run001

Genes of Fundulus heteroclitus, atlantic killifish reconstructed with EvidentialGene

Description:: The evigene_killifish2014 archive package contains a complete, reconstructed gene set of Fundulus heteroclitus, atlantic killifish, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Title:: Genes of Fundulus heteroclitus, atlantic killifish reconstructed with EvidentialGene

2016 Student Cluster Competition

Description:: Download the software applications used for the 2016 Student Cluster Competition by clicking the URLs below: Gromacs (6 MB); Paraview (6 GB); ParConnect (800 MB); Distributed Password Auditing/Recovery (125 MB). ParConnect sequence data were produced by the US Department of Energy Joint Genome Institute http://www.jgi.doe.gov/ in collaboration with the user community. Note that download times may vary.
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Title:: 2016 Student Cluster Competition

Vortex II Forecast Data - forecast_20100530160000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100530160000Z_run001

The History of the Feminine Costume of the World, from the year 5318 B.C. to our century

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Title:: The History of the Feminine Costume of the World, from the year 5318 B.C. to our century

Vortex II Forecast Data - forecast_20100504150000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100504150000Z_run001

CentOS 7 Generic Cloud Raw VM Image

Description:: This is a sample CentOS 7 Generic Cloud Raw VM Image for use with Openstack. This is an example of an image to be saved from Jetstream.
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Title:: CentOS 7 Generic Cloud Raw VM Image

Genes of Daphnia galeata reconstructed with EvidentialGene

Description:: The evigene_daphnia_galeata2016 archive package contains a complete, reconstructed gene set of Daphnia galeata, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Title:: Genes of Daphnia galeata reconstructed with EvidentialGene

Vortex II Forecast Data - forecast_20100606170000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100606170000Z_run001

Vortex II Forecast Data - forecast_20100526140000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100526140000Z_run001

Genes of Rhipicephalus pulchellus, zebra tick reconstructed with EvidentialGene

Description:: The evigene_tick_rhipic2014 archive package contains a complete, reconstructed gene set of Rhipicephalus pulchellus, zebra tick, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Title:: Genes of Rhipicephalus pulchellus, zebra tick reconstructed with EvidentialGene

Vortex II Forecast Data - forecast_20100607160000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100607160000Z_run001

Genes of Bemisia tabaci, whitefly reconstructed with EvidentialGene

Description:: The evigene_whitefly_bemitab2017 archive package contains a complete, reconstructed gene set of Bemisia tabaci, whitefly, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Title:: Genes of Bemisia tabaci, whitefly reconstructed with EvidentialGene

Genes of Aedes aegypti, mosquito reconstructed with EvidentialGene

Description:: The evigene_mosquito_aedes2016 archive package contains a complete, reconstructed gene set of Aedes aegypti, mosquito, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Title:: Genes of Aedes aegypti, mosquito reconstructed with EvidentialGene

Vortex II Forecast Data - forecast_20100528120000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100528120000Z_run001

Vortex II Forecast Data - forecast_20100612120000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100612120000Z_run001

Vortex II Forecast Data - forecast_20100524140000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100524140000Z_run001

Vortex II Forecast Data - forecast_20100615140000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100615140000Z_run001

Vortex II Forecast Data - forecast_20100611150000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100611150000Z_run001

Vortex II Forecast Data - forecast_20100601140000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100601140000Z_run001

Vortex II Forecast Data - forecast_20100516160000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100516160000Z_run001

WQ-MAKER: Scaling genome annotation with MAKER using distributed computing and cloud resources on Jetstream cloud

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Title:: WQ-MAKER: Scaling genome annotation with MAKER using distributed computing and cloud resources on Jetstream cloud

"Unraveling the geometry of the Farallon Plate: Synthesis of three-dimensional imaging results from the USArray", electronic supplement

Description:: Data are contained in a single zip file. Contents of the zip file are in a single directory with the name Supplement. That directory contains a pdf file called README.pdf describing the total contents. and Full Author List: Gary L. Pavlis, Department of Geological Sciences, 1001 East 10th Street, Indiana University, Bloomington, IN 47405 ( pavlis@indiana.edu); Karin Sigloch, Department of Earth and Environmental Sciences, Ludwig-Maximilians-Universitat, Theresienstrasse 41, D-80333, Munich, Germany ( sigloch@geophysik.uni-muenchen.de ); Scott Burdick, Department of Earth, Atmospheric, and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts ( sburdick@mit.edu); Matthew J. Fouch, Department of Terrestrial Magnetism, Carnegie Institution of Washington, 5241 Broad Branch Road, NW, Washington, DC 20015 ( fouch@dtm.ciw.edu ); Frank Vernon, Institute of Geophysics and Planetary Physics (IGPP), University of California, San Diego, La Jolla, CA ( flvernon@ucsd.edu )
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Title:: "Unraveling the geometry of the Farallon Plate: Synthesis of three-dimensional imaging results from the USArray", electronic supplement

Ultraviolet Photodissociation for Characterization of Whole Proteins on a Chromatographic Time Scale.

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Title:: Ultraviolet Photodissociation for Characterization of Whole Proteins on a Chromatographic Time Scale.

Vortex II Forecast Data - forecast_20100522140000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100522140000Z_run001

Genes of Daphnia pulex reconstructed with EvidentialGene

Description:: The evigene_daphnia_pulex2010 archive package contains a complete, reconstructed gene set of Daphnia pulex, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Title:: Genes of Daphnia pulex reconstructed with EvidentialGene

Characterization of Native Protein Complexes Using Ultraviolet Photodissociation Mass Spectrometry

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Title:: Characterization of Native Protein Complexes Using Ultraviolet Photodissociation Mass Spectrometry

Vortex II Forecast Data - forecast_20100523140000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100523140000Z_run001

Vortex II Forecast Data - forecast_20100515170000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100515170000Z_run001

Genes of Lytechinus variegatus, green sea urchin reconstructed with EvidentialGene

Description:: The evigene_seaurchin_lytvar2017 archive package contains a complete, reconstructed gene set of Lytechinus variegatus, green sea urchin, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Title:: Genes of Lytechinus variegatus, green sea urchin reconstructed with EvidentialGene

Vortex II Forecast Data - forecast_20100502150000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100502150000Z_run001

Genes of Theobroma cacao, chocolate tree reconstructed with EvidentialGene

Description:: The evigene_cacao2013 archive package contains a complete, reconstructed gene set of Theobroma cacao, chocolate tree, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Title:: Genes of Theobroma cacao, chocolate tree reconstructed with EvidentialGene

Vortex II Forecast Data - forecast_20100530120000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100530120000Z_run001

Vortex II Forecast Data - forecast_20100611120000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100611120000Z_run001

Wrangler iRODS -- CentOS 6.7

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Title:: Wrangler iRODS -- CentOS 6.7

Vortex II Forecast Data - forecast_20100524120000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100524120000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100527160000Z_run001

geo-c7d-bm-160810-001 - Geo's CentOS 7 Benchmarking VM

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Title:: geo-c7d-bm-160810-001 - Geo's CentOS 7 Benchmarking VM

Vortex II Forecast Data - forecast_20100607130000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100607130000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100531140000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100508150000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100507140000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100514160000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100430120000Z_run001

Vortex II Forecast Data - forecast_20100518160000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100518160000Z_run001

Ubuntu 14.04.3 Trusty Tahr

Description:: Initial Jetstream Featured image. Based on Ubuntu 14.04.3 Development Patched up to date as of 3/28/16 Base Ubuntu 14.04.3
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Title:: Ubuntu 14.04.3 Trusty Tahr

Vortex II Forecast Data - forecast_20100531120000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100531120000Z_run001

Vortex II Forecast Data - forecast_20100508110000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100508110000Z_run001

Genes of Ixodes scapularis, deer tick reconstructed with EvidentialGene

Description:: The evigene_tick_ixoscap2014 archive package contains a complete, reconstructed gene set of Ixodes scapularis, deer tick, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Title:: Genes of Ixodes scapularis, deer tick reconstructed with EvidentialGene

Vortex II Forecast Data - forecast_20100528140000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100528140000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100525140000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100526150000Z_run001

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Title:: Vortex II Forecast Data - forecast_20100517170000Z_run001

Data for "Spatially variable increase in rock uplift in the northern U.S. Cordillera recorded in the distribution of river knickpoints and incision depths"

Description:: Click on the PURL link below in the "Link(s) to data and video for this item" section to download the dataset.
Citation to related publication:
Title:: Data for "Spatially variable increase in rock uplift in the northern U.S. Cordillera recorded in the distribution of river knickpoints and incision depths"

Data for "Quantifying normal fault evolution from river profile analysis in the Northern Basin and Range province, Southwest Montana, USA"

Citation to related publication:
Title:: Data for "Quantifying normal fault evolution from river profile analysis in the Northern Basin and Range province, Southwest Montana, USA"