The evigene_locust_locumig2013 archive package contains a complete, reconstructed gene set of Locusta migratoria migratoria, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
Citation to related publication:
Title:
Genes of Locusta migratoria migratoria reconstructed with EvidentialGene
A single ".ova" file encompassing an Ubuntu-based (v. 16.04) virtual machine (VM). This VM is the "artifact" used in the artifact evaluation of the corresponding PPoPP17 paper. It contains the complete software, such as example programs and benchmark programs, necessary to reproduce the results of the paper. Scripts are included in the virtual machine to automatically run benchmarks and compare their results. Download the VM by clicking the link below under "Link(s) to data and video for this item."
Citation to related publication:
Title:
Bundled VM artifact to accompany paper entitled SC-Haskell: Sequential Consistency in Languages That Minimize Mutable Shared Heap
The evigene_catfish2013 archive package contains a complete, reconstructed gene set of Ictalurus punctatus, catfish, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
Citation to related publication:
Title:
Genes of Ictalurus punctatus, catfish reconstructed with EvidentialGene
Data variables can be found in Yanites, 2018 Journal of Geophysical Research: Earth Surface as well as in the model code uploaded to the Community Surface Dynamic Modeling System infrastructure.
Citation to related publication:
Title:
Data scripts for modeling dynamic width and slope evoluton of actively eroding rivers
The two major components of this supplement are packaged as two separate UNIX tar files available through links below. The two tar file names are:
(1) ModelConstructionDetails.tar - this contains the pdf file with the text (file name SupplementText.pdf) describing the technical details of how the 3D model was constructed. The package also contains a directory called Figures that contain five interactive figures. The SupplementText.pdf file contains links to these files that will resolve only if the files are left in that directory. There is also a small README text file to make the set of files more self contained.
(2) DataSupplement.tar - this is the package of data files that form the data supplement. The organization of the files in the package and file descriptions are described in the pdf file with the name DataSupplementDescription.pdf. That file can also be accessed directly from the link below.
Citation to related publication:
Title:
Electronic Supplement to “A Unified Three-dimensional Model of the Lithospheric Structure at the Subduction Corner in Southeast Alaska: Summary Results from STEEP”
The evigene_wasp_nasvit2012 archive package contains a complete, reconstructed gene set of Nasonia vitripennis, jewel wasp, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
Citation to related publication:
Title:
Genes of Nasonia vitripennis, jewel wasp reconstructed with EvidentialGene
The evigene_corn2016 archive package contains a complete, reconstructed gene set of Zea mays, corn plant, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
Citation to related publication:
Title:
Genes of Zea mays, corn plant reconstructed with EvidentialGene