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- Creator:
- Gómez-Felipe, Andrea, Wong, Kaitlyn , Johnson, Aaralyn, Kosty, Melissa, Long, Jeffrey, Kierzkowski, Daniel, and Nikolov, Lachezar A
- Description:
- This dataset contains confocal imaging and single-cell data used to characterize the developmental trajectories of Arabidopsis lateral and median nectaries. The repository includes: *3D cell tracking: 3D segmentation and quantitative imaging tracking to characterize the developmental patterns of lateral and median nectaries. The data highlights differences in cell expansion, proliferation, and volumetric growth of the nectary epidermis and nectary sub-epidermal cells/parenchyma cells. *Single-Cell transcriptomics: Gene expression and marker gene analysis identifying nectary-specific cell clusters.
- Title:
- Live imaging confocal data, marker genes and nectary cell trajectory datasets.
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- Creator:
- Narlock, Mikala R., Gandrapu, Lahari, and Fridmanski, Ethan
- Description:
- Data are provided in a CSV. The attached PDF provides details on how the data were collected.
- Title:
- Dataset Sharing in Institutional Data Repositories: Data from 2020-2026
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- Creator:
- Scott, Liam W.
- Description:
- In this study, we computationally analyzed published structures of Hepatitis B virus core protein (HBc) bound with different core protein assembly modulators (CAMs) that interfere with HBV assembly. We focused on comparing the difference in CAM binding between two mutations of HBc, one that forms flat sheets, and one that forms icosahedra similar to the wild type virus capsid. We did this by aligning all currently published HBc-CAM structures by their CAM binding pockets. This allowed us to both quantitatively and qualitatively compare the CAM binding pockets of these two different structure types. We find that there are critical differences in the angle of interaction, capsid orientation angle, CAM pocket shapes and sizes, and CAM interacting residues between icosahedral and sheet based HBc structures.
- Title:
- Assembly-active and -inactive forms of HBV capsid protein provide distinctly different binding sites for capsid assembly modulators
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- Creator:
- Park, Taemin Kim and Morrison, Andrea M.
- Description:
- Date derived from a sample of OCLC records. Data was collected for research published by "Cataloging & Classification Quarterly." Full citation of the paper is: Park, Taemin Kim & Andrea M. Morrison (2017). The Nature and Characteristics of Bibliographic Relationships in RDA Cataloging Records in OCLC at the Beginning of RDA Implementation. Cataloging & Classification Quarterly, vol. 55, issue 6. http://www.tandfonline.com/doi/full/10.1080/01639374.2017.1319451. A post-print of the paper is available here: http://hdl.handle.net/2022/21657.
- Keyword:
- Bibliographic relationships, work-to-work relationships, expression-to-expression relationships, manifestation-to-manifestation relationships, cataloging, MARC fields, and RDA
- Citation to related publication:
- http://www.tandfonline.com/doi/full/10.1080/01639374.2017.1319451
- Title:
- Data for "The Nature and Characteristics of Bibliographic Relationships in RDA Cataloging Records in OCLC at the Beginning of RDA Implementation"
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- Creator:
- Niccum, Brittany A, Lee, Heewook, Ismail, Wazim Mohammed, Tang, Haixu, and Foster, Patricia L
- Description:
- Excel file format (xlsx)
- Keyword:
- evolution, mutation accumulation, and neutral mutation
- Title:
- List of base-pair substitutions in "The symmetrical pattern of base-pair substitutions rates across the chromosome in Escherichia coli has multiple causes"
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- Creator:
- Kaiyuan, Liu and Haixu, Tang
- Description:
- n/a
- Keyword:
- Spectrum Prediction, Tandem Mass Spectra, and Deep Neural Network
- Citation to related publication:
- http://www.predfull.com/datasets
- Title:
- Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
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- Creator:
- Cohen, Rachael and Michaels, Sherri
- Description:
- Dataset for "Comparing Transaction Logs to ILL requests to Determine the Persistence of Library Patrons In Obtaining Materials" article. Excel file contains all data in four worksheets Zip file contains four csv files, one for each worksheet: - Comparing Transaction Logs to ILL - 2016 ILL Raw Data.csv - Comparing Transaction Logs to ILL - 2015 ILL Raw Data.csv - Comparing Transaction Logs to ILL - 2016 Zero Search Raw Data.csv - Comparing Transaction Logs to ILL - 2015 Zero Search Raw Data.csv
- Keyword:
- Interlibrary Loan, Zero Search Results, and IUCAT
- Title:
- Comparing Transaction Logs to ILL - Raw Data
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- Creator:
- Whittaker, Thomas A.
- Description:
- Data transcribed from authority records matching relevant search criteria submitted to OCLC. MARC records retrieved July 11, 2017 via OCLC Connexion Client. Data entry completed September, 12, 2017. Data entered in exact transcription, retaining any errors or typos found in the retrieved records.
- Keyword:
- MARC, Authority records, Controlled vocabulary, Other designation associated with person, and RDA 9.6
- Title:
- MARC 21 Authority 368 Subfield 'C' Data
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- Creator:
- Lorenz, Tierney K, Worthman, Carol M, and Vitzthum, Virginia J
- Description:
- There are two files: a README describing the main data file, and a main data file. The main data file is plain ASCII, tab delimited, with header comments.
- Title:
- Data set for article "Links among inflammation, sexual activity and ovulation: Evolutionary trade-offs and clinical implications"
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- Creator:
- Marion, Monica M and Milojevic, Stasa
- Description:
- Data was compiled from several publicly available sources of scientific and educational data (NSF Awards Search, SciSciNet data lake, Web of Science broad disciplinary, Lightcast skills, O*Net Content Model Reference) with details and links available in the dataset readme. Text from these data sources was processed using NLP methods in a series of Python and R scripts, available with full description in the dataset repository at https://github.com/monica-marion/Interdisciplinary-Training-Grants-Collection.
- Title:
- The NSF interdisciplinary training grants dataset
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- Creator:
- Fridmanski, Ethan
- Description:
- edgesPort.csv: is the processed data derived from https://www.soundtoll.nl/, I cleaned up the data and removed artifacts (such as unclear port names etc...). The exact cleaning process can be found in the R files. The following variables are included: from_port: port (i) the passage comes FROM to_port: port (j) the passage is going TO year: year the relationship is captured Note: edge weights (frequency of passages between port pairs within each time period) are constructed from the edgelist within the str_net_eda.r file and are not present in edgesPort.csv. --- db.r: This file constructs the SQL database from the raw files. It is not directly used in the edgelist construction. I am including it for transparency sake. --- queries.r: This file performs SQL queries to construct the edgelist. --- str_net_eda.r: This file conducts the network topology used in a forthcoming publication: The Structure of European Maritime Trade: A Network Topology of the Sound Toll Registers, 1670-1857 (sent out for review)
- Keyword:
- network analysis, Sound Toll Registers, Baltic trade, early modern, and eigenvector centrality
- Title:
- Sound Toll Registers Edgelist (1670-1857)
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- Creator:
- Gabler, Mikaela C, Martin, Bruce J, Johnson, Blair D, Schlader, Zachary J, and Chapman, Robert F
- Description:
- The purpose of this study was to examine how IMW affects the sensory and affective components of dyspnea, exercise performance, and NIRS-derived metaboreflex effects during a cycling time to exhaustion test. Additionally, to augment the ventilatory response for better elucidation of the cardiorespiratory effects of IMW, we added hypoxia as an intervention. Using both normoxic and hypoxic conditions, our hypotheses were: 1) both sensory and affective components of dyspnea would be attenuated following IMW in each condition, 2) the extent of skeletal muscle deoxygenation (i.e., a NIRS-derived surrogate for the metaboreflex) in the leg would be reduced after IMW in each condition, and 3) participants’ time to exhaustion would be prolonged following IMW in each condition.
- Keyword:
- altitude, breathlessness, dyspnea, metaboreflex, and respiratory
- Title:
- Effects of inspiratory muscle warm-up on perceptual, physiological, and performance outcomes during high-intensity exercise in normoxia and hypoxia
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- Creator:
- Главное Управление Геодезии и Картографии при СНК СССР
- Description:
- Modern area represented: Chern, Tula oblast, Russia
- Citation to related publication:
- https://libraries.indiana.edu/russian-topographic-maps
- Title:
- N-37-86-D
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- Title:
- Quantitative measurement of intact alpha-synuclein proteoforms from post-mortem control and Parkinson's disease brain tissue by intact protein mass spectrometry
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- Description:
- Modern area represented: Pultusk, Masovian Voivodeship, Poland
- Citation to related publication:
- https://libraries.indiana.edu/russian-topographic-maps
- Title:
- N-34-115
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- Creator:
- Sizek, Herbert
- Description:
- The Concordant Crop Sequence Boundaries improves the stabilty and accuracy of the USDA Crop Sequence Boundaries by altering the agglomeration method to be based on the simiarilty of crop sequences rather than on the longest shared boundary. This work aims to provide accurate temporal field boundaries for the Contiguous United States through time.
- Keyword:
- Agriculture, Field Boundaries, and Land Cover
- Title:
- concordant Crop Sequence Boundaries
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- Creator:
- Jung, Ilyoung, Kyprianidis, Antonis, Schroer, Frank G., Burkle, Thomas W., Lyons, Jack, and Richerme, Philip
- Description:
- SD spectroscopy folder: the raw h5py files stored in the folder with date when the experiment taken / recorded RID(experiment name) and average mean counts over 20 repeitions in Excel files (SD spectroscopy RID only1 and SD spectroscopy) / SD spectroscopy.py for data analysis. Shelving rate: raw h5py file in the folder with date when the experiment taken / recorded RID (experiment name) in Excel file (411 Optical pumping) / Shelving rate.py for data analysis Shelving experiment: raw h5py file in the folder with date when the experiment taken / recorded RID (experiment name) in Excel file for each case of shelving (Shelving data1 for three ion dynamics: each column for each shelving configuration and a group of 4 RIDs corresponds to single time point & Two ion shelving exp for two ion dynamics: first column as time point, the others are RID at that time point) / Three ion shelving experiment data analysis.py and Two ion shelving experiment data analysis.py for data analysis. Deshelving rate: raw h5py file in the folder with date when the experiment taken / recorded RID (experiment name) in Excel file for each Rabi frequency case (Deshelving RID xx kHz) / Deshelving rate.py for data analysis
- Citation to related publication:
- arXiv preprint arXiv:2602.10307
- Title:
- Dataset for "In-Situ Rewiring of Two-Dimensional Ion Lattice Interactions Using Metastable State Shelving"
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- Creator:
- Dekydtspotter, Laurent, Miller, A. Kate, Iverson, Mike, Cha, Jih-ho, Yang, Ludan, Gilbert, Jane, Zhang, Hongyu, Meinert, Kent , Li, Qin, and Ahn, Jae Hyun
- Description:
- The stimuli consisted of 200 items, among which 100 critical items included 25 quadruples as in (1a-d), with 50 more English-like items in which the gender of the clitic or strong pronoun reflected the gender of the antecedent (1a, b), and 50 less English-like items in which the genitive pronoun agreed in gender with the head noun of the genitive structure rather than with the antecedent (1c, d). Of these second 50 items, 25 had a female antecedent in the matrix clause as in (1c), and 25 had a male antecedent as in (1d). Similarly, half of the more English-like items (1a, b) involved masculine pronouns le and lui ‘3p.sing.masc’ and half involved feminine pronouns la and elle ‘3p.sing.fem’. Crucially, antecedent-gender-specified pronouns la and elle and antecedent-gender-unspecified pronoun son all allow the retrieval of the matrix subject as the antecedent. The 100 distractor items involved complex interrogative structures and permutations like target items, counterbalanced so that no grouping stood out. (1a) Quelle décision le concernant est-ce que Paul a dit t que Lydie avait rejetée t which decision him regarding is-it that Paul has said that Lydie had rejected sans hésitation ? without hesitation ‘Which decision regarding him did Paul say that Lydie had rejected without hesitation?’ (1b) Quelle décision à propos de lui est-ce que Paul a dit t que Lydie avait rejetée t which decision about him is-it that Paul has said that Lydie had rejected sans hésitation ? without hesitation ‘Which decision about him did Paul say that Lydie had rejected without hesitation?’ (1c) Quelle décision à son sujet est-ce que Paul a dit t que Lydie avait rejetée t which decision about him/her is-it that Paul has said that Lydie had rejected sans hésitation ? without hesitation ‘Which decision regarding him did Paul say that Lydie had rejected without hesitation? (1d) Quelle décision à son sujet est-ce que Lydie a dit t que Paul avait rejetée t which decision about him is-it that Lydie has said that Paul had rejected sans hésitation ? without hesitation ‘Which decision about him did Lydie say that Paul had rejected without hesitation?’ E-Prime delivered the stimuli in a rapid serial visual presentation (RSVP) reading task. The stimuli appeared word by word at the center of the screen in 36-point Consolas font, using normal orthographic conventions. They appeared in four blocks presented in random order. Within each block, stimuli were also presented in random order. Participants sat in a chair facing a computer monitor at a distance of approximately four feet. A fixation cross at the center of the screen preceded each item, lasting 700ms. The task was found to be hard but manageable to advanced L2 speakers in stimuli preparation. Due to the time required for E-prime to load each word and for the monitor’s refresh rate, the total presentation time per word was 566ms (300ms presentation, 250ms interstimulus interval, and a 16ms refresh rate between words) accommodating L2 speakers without being unnaturally slow for L1 speakers. Respondents were trained to read questions like the stimuli and then accept or reject follow-up comprehension statements, which were presented in their entirety for a maximum of 3500ms. These comprehension checks were of several types: Some examined the propensity for an anaphoric interpretation, while others queried other aspects of the sentences. Participants quickly responded to the statements by pressing the left arrow key for ‘Yes/True’ and the right arrow key for ‘No/False.’ There was a training session of six items, which could be repeated before moving on to the experiment. In the training, all items were followed by a comprehension statement; in the task, only two thirds were. However, L1 and L2 speakers alike interpreted the pronoun as referring to the gender-matched noun phrase 70% of the time in critical stimuli. Naturally, a set of questions like our stimuli seems plausible in only a limited set of situations. Thus, respondents were introduced to a context involving two characters who were devoted followers of a television series. One of the characters, however, had missed some episodes and asked the other character questions to catch up.
- Keyword:
- Merge, Movement, Language Faculty, EEG, Biolinguistics, and Bilingualism
- Title:
- Dataset for Aperiodic Dynamics for L1 and L2 Processing of French Wh-Dependencies
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- Creator:
- Paul Farrugia
- Description:
- Paleoclimate values for Olduvai Gorge obtained through ancestral state reconstructions using a Brownian model of evolution.
- Title:
- Dataset 2 - Reconstructed Values
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- Creator:
- Gary R. Kidd, Charles S. Watson, and Brian Gygi
- Description:
- The data show performance on 19 tests of auditory abilities, with 340 subjects. The data include: 1. Percent correct for each of the 19 TBAC tests used in the 2007 study 2. Arcsine transformed values of the PC scores (names ending in “AS”) 3. Percentile values for the Arcsine-transformed scores (names ending in “ASp”) 4. Latent variable scores for four independent auditory factors, plus a general auditory ability factor, as described in KWG 2007. Sex and race data are also included. For a subset of subjects, SAT scores, GPA, and an IQ estimate (based on SAT scores) is also provided.
- Keyword:
- auditory, speech, hearing, listening, and individual differences
- Citation to related publication:
- Kidd, G. R., Watson, C. S., & Gygi, B. (2007). Individual differences in auditory abilities. The Journal Of The Acoustical Society Of America, 122(1), 418-435.
- Title:
- Individual Differences in Auditory Abilities: The Expanded TBAC dataset