The evigene_shrimp_litova2013 archive package contains a complete, reconstructed gene set of Litopenaeus vannamei, white shrimp, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Genes of Litopenaeus vannamei, white shrimp reconstructed with EvidentialGene
Thesis (D.M.) - Indiana University, Jacobs School of Music, 2020. The EPUB for this item is available for download under "Link(s) to data and video for this item."
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Teaching Pre-College Organ Students: Methods of the Twenty-First Century
The evigene_aphid_acypi2011 archive package contains a complete, reconstructed gene set of Acyrthosiphon pisum, pea aphid, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Genes of Acyrthosiphon pisum, pea aphid reconstructed with EvidentialGene
The evigene_daphnia_similoides2017 archive package contains a complete, reconstructed gene set of Daphnia similoides, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Genes of Daphnia similoides reconstructed with EvidentialGene
There are two components to this project: a video documentary and a paper. The documentary, entitled "Silver Angel and Apollo X: A Glimpse into Nadina Mackie Jackson’s Canadian Bassoon Concerto Project," introduces Nadina Mackie Jackson’s career as a solo bassoonist and follows preparations for the premieres of Silver Angel and Apollo X. The paper focuses on Nadina Mackie Jackson’s career as a solo bassoonist and Paul Frehner’s Apollo X. Video Documentary Parts: 1 Introducing Nadina Mackie Jackson; 2) Meet Paul Frehner and Constantine Caravassilis; 3) Preparing to Write for the Bassoon; 4) Writing the Concertos: 5) The Nitty Gritty of the Concertos; 6) The Premieres; 7) On Being a Solo Bassoonist; 8) Final Thoughts. All eight parts are available as one zip file by clicking on the link under "Link(s) to data and video."
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Silver Angel and Apollo X: A Glimpse into Nadina Mackie Jackson's Canadian Bassoon Concerto Project
The evigene_arabidopsis2017 archive package contains a complete, reconstructed gene set of Arabidopsis thaliana, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Genes of Arabidopsis thaliana reconstructed with EvidentialGene
The evigene_beetle_pogocha2013 archive package contains a complete, reconstructed gene set of Pogonus chalceus, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Genes of Pogonus chalceus reconstructed with EvidentialGene
The evigene_pinetree2013 archive package contains a complete, reconstructed gene set of Pinus taeda, loblolly pine tree, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents. Click on the PURL link below in the "External Files" section to download the dataset.
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Genes of Pinus taeda, loblolly pine tree reconstructed with EvidentialGene
The evigene_zebrafish2017 archive package contains a complete, reconstructed gene set of Danio rerio, zebrafish, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Genes of Danio rerio, zebrafish reconstructed with EvidentialGene
The evigene_beetle_tribolium2014 archive package contains a complete, reconstructed gene set of Tribolium castaneum, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Genes of Tribolium castaneum reconstructed with EvidentialGene
Kindly report errors to Professor Chen Zhu ( supcrt@indiana.edu). Tutorials, corrections, and updates may be found at Professor Zhu’s research web site https://hydrogeochem.earth.indiana.edu. Users of this program should also acknowledge and cite these articles:
Parkhurst, D.L., Appelo, C., 2013. Description of input and examples for PHREEQC version 3--A computer program for speciation, batch-reaction, one-dimensional transport, and inverse geochemical calculations. Techniques and Methods 6-A43, U.S. Geological Survey, Reston, VA., 497.
Johnson, J.W., Oelkers, E.H. and Helgeson, H.C. (1992) SUPCRT92 - A software package for calculating the standard molal thermodynamic properties of minerals, gases, aqueous species, and reactions from 1-bar to 5000-bar and 0°C to 1000°C. Computer & Geosciences 18:899-947.
Zimmer, K., Zhang, Y., Lu, P., Chen, Y., Zhang, G., Dalkilic, M., Zhu, C., 2016. SUPCRTBL: A revised and extended thermodynamic dataset and software package of SUPCRT92. Computer & Geosciences 90, 97-111.
This work was partly supported by NSF grant EAR-19267343 and the Office of the Vice Provost for Research of Indiana University.
Click on the PURL link below in the "Link(s) to data and video for this item" section to download the dataset.
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Data for "Spatially variable increase in rock uplift in the northern U.S. Cordillera recorded in the distribution of river knickpoints and incision depths"
The evigene_tick_ixoscap2014 archive package contains a complete, reconstructed gene set of Ixodes scapularis, deer tick, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Genes of Ixodes scapularis, deer tick reconstructed with EvidentialGene
The evigene_cacao2013 archive package contains a complete, reconstructed gene set of Theobroma cacao, chocolate tree, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Genes of Theobroma cacao, chocolate tree reconstructed with EvidentialGene
The evigene_seaurchin_lytvar2017 archive package contains a complete, reconstructed gene set of Lytechinus variegatus, green sea urchin, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Genes of Lytechinus variegatus, green sea urchin reconstructed with EvidentialGene
The evigene_daphnia_pulex2010 archive package contains a complete, reconstructed gene set of Daphnia pulex, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Genes of Daphnia pulex reconstructed with EvidentialGene
Data are contained in a single zip file. Contents of the zip file are in a single directory with the name Supplement. That directory contains a pdf file called README.pdf describing the total contents. and Full Author List: Gary L. Pavlis, Department of Geological Sciences, 1001 East 10th Street, Indiana University, Bloomington, IN 47405 ( pavlis@indiana.edu); Karin Sigloch, Department of Earth and Environmental Sciences, Ludwig-Maximilians-Universitat, Theresienstrasse 41, D-80333, Munich, Germany ( sigloch@geophysik.uni-muenchen.de ); Scott Burdick, Department of Earth, Atmospheric, and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts ( sburdick@mit.edu); Matthew J. Fouch, Department of Terrestrial Magnetism, Carnegie Institution of Washington,
5241 Broad Branch Road, NW, Washington, DC 20015 ( fouch@dtm.ciw.edu ); Frank Vernon, Institute of Geophysics and Planetary Physics (IGPP), University of California, San Diego, La Jolla, CA ( flvernon@ucsd.edu )
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"Unraveling the geometry of the Farallon Plate: Synthesis of three-dimensional imaging results from the USArray", electronic supplement
The evigene_mosquito_aedes2016 archive package contains a complete, reconstructed gene set of Aedes aegypti, mosquito, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Genes of Aedes aegypti, mosquito reconstructed with EvidentialGene
The evigene_whitefly_bemitab2017 archive package contains a complete, reconstructed gene set of Bemisia tabaci, whitefly, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Genes of Bemisia tabaci, whitefly reconstructed with EvidentialGene
The evigene_tick_rhipic2014 archive package contains a complete, reconstructed gene set of Rhipicephalus pulchellus, zebra tick, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Genes of Rhipicephalus pulchellus, zebra tick reconstructed with EvidentialGene
The evigene_daphnia_galeata2016 archive package contains a complete, reconstructed gene set of Daphnia galeata, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
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Genes of Daphnia galeata reconstructed with EvidentialGene
