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- Description:
- This paricular collection contains namelist.input, cape.zip, radar.zip, precip.zip, surface.zip, updraft_helicity.zip, vorticity.zip, xsec.zip, and wrfout_d01_2010-05-02_13_00_00.nc.namelist is configuration file of WRF. cape is short for Convective Available Potential Energy, a measure of the instability in an air mass. cape.zip is the visualization of cape and contains 24 png files. radar is Mix of radar minimum and radar maximum visualizations. radar.zip represents the mixed results of putting those two radar types together. radar.zip is the visualization of vorticity and contains 28 png files. precip is short for Precipitation, the sum of the rain, snow and hail in given in liquid equivalent depth. precip.zip is the visualization of precip and contains 4 png files. surface is meteorological parameters on the earth's surface, or in a model on the first level above the ground. surface.zip is the visualization of surface and contains 16 png files. updraft_helicity is the dot product of the vertical velocity and the vertical vorticity. It is presented as a summation over a 3-km depth. updraft_helicity.zip is the visualization of updraft_helicity and contains 16 png files. vorticity is the localized rotation of the air. In model plots it is often the vertical component of vorticity, the rotation of the horizontal winds. vorticity.zip is the visualization of vorticity and contains 16 png files. xsec is is the cross section. xsec.zip is the visualization of xsec and contains 51 png files. wrfout_d01_2010-05-02_13_00_00 is computational result of WRF.
- Citation to related publication:
- Title:
- Vortex II Forecast Data - forecast_20100519150000Z_run001
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- Creator:
- MISSING
- Description:
- Supplementary ZIP folder of course materials included for download under "Link(s) to data and video for this item".
- Citation to related publication:
- Title:
- Sacred Music Online Course: An Internet-based Practicum for Organists and Church Musicians
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Polyanionic sugars drastically affect assembly of Human Papilloma Virus Virus-like particles dataset
- Creator:
- Patterson, Angela, Young, Kim, Biever, MacRyan P., Klein, Shelby, Jacobson, Stephen C., Jarrold, Martin F., and Zlotnick, Adam
- Description:
- Raw data associated with the paper "Polyanionic sugars drastically affect assembly of Human Papilloma Virus Virus-like particles" by Patterson et al.
- Citation to related publication:
- Title:
- Polyanionic sugars drastically affect assembly of Human Papilloma Virus Virus-like particles dataset
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- Creator:
- Fernandez, Maria de la Paz
- Description:
- DAM2 Drosophila Activity Monitors (TriKinetics, Waltham, MA) were used to record the locomotor activity rhythms of adult male, and virgin female, flies aged three- to five-days, as previously described [39]. Flies were entrained to 12:12 LD or LAN cycles for at least five days and then transferred to constant darkness (DD) for at least eight days at a constant temperature of 25°C. Activity counts were collected in 1-minute intervals, which were subsequently binned into 30-minute intervals for conducting time-series analysis on locomotor activity. Averaged population activity profiles of specific genotypes in entrainment (LD or LAN) were generated in Matlab (MathWorks, Natick) using PHASE [40]. First, individual fly activity levels were normalized by establishing the average activity across all 30-minute bins over days 2-4 under LD or LAN as 1.0. Subsequently, population averages of this normalized activity were computed for each 30-minute bin. Finally, the population averages for the LD or LAN cycles were averaged into a single representative 24-hour day.
- Keyword:
- Light pollution, Drosophila, Behavioral Neurobiology, Circadian Rhythms, and Neurogenetics
- Citation to related publication:
- Title:
- Pranevicius et al_LAN_Raw Data
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- Creator:
- Danthi, Pranav
- Description:
- Apoptosis is a common host response to virus infection. The extent and timing of apoptosis following infection is controlled by the balance between the strength of signals that activate death signaling and those that promote the survival of cells. In many cell types, infection with Mammalian orthoreovirus (reovirus) results in induction of cell death by apoptosis late in infection. In this study, we uncovered that WD repeat-containing protein 81 (WDR81) is required for apoptosis induction after reovirus infection. The requirement for WDR81 for apoptosis induction is not unique to reovirus because cells lacking WDR81 are also resistant to apoptosis induced by other agonists that trigger the extrinsic apoptotic pathway. We find that in cells deficient in WDR81, expression of several pro-survival genes is upregulated. The expression of these genes is controlled by the inhibitor of kB kinase complex (IKK)-Nuclear Factor of kB (NFκB) signaling pathway. When IKK signaling is blocked in WDR81-deficient cells, pro-survival gene expression is restored to normal levels and the cells regain their susceptibility to reovirus-induced death receptor-triggered apoptosis. Our work uncovers a new function for WDR81 in controlling apoptosis. Additionally, it reveals a previously unknown link between endosomally localized protein WDR81 and IKK-NFκB signaling.
- Citation to related publication:
- Title:
- WDR81 controls IKK dependent cell survival
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- Creator:
- Indiana Geographic Information Office
- Description:
- Includes geodatabases with address points, street centerlines, parcels, county boundaries, and other assorted geographic units for years 2013, 2014, 2015, 2018. There is limited metadata for these data and they are not otherwise publicly available. Please contact the Indiana Geographic Information Office for more information.
- Keyword:
- Indiana GIS spatial data
- Citation to related publication:
- https://data-harvest-ingov.hub.arcgis.com/
- Title:
- 2013-2018 Indiana Statewide Geospatial Data Harvest
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- Creator:
- Indiana Geographic Information Office
- Description:
- Includes geodatabase with statewide address points, street centerlines, parcels, and county boundaries for Indiana, 2024. Also includes zipped shapefiles for individual counties, state geocoder, and real property geodatabase.
- Keyword:
- Indiana, GIS, spatial data
- Citation to related publication:
- https://dataharvest.gio.in.gov/
- Title:
- 2024 Indiana Statewide Geospatial Data Harvest
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- Creator:
- Indiana Geographic Information Office
- Description:
- Includes geodatabase with statewide address points, street centerlines, parcels, and county boundaries for Indiana, 2020. Also includes zipped shapefiles for individual counties, state geocoder, and real property geodatabase. See inventory file for full description of geodatabase layers, and metadata file for more information.
- Keyword:
- Indiana, GIS, and Spatial Data
- Citation to related publication:
- https://dataharvest.gio.in.gov/
- Title:
- 2020 Indiana Statewide Geospatial Data Harvest
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- Creator:
- Indiana Geographic Information Office
- Description:
- Includes geodatabase with statewide address points, street centerlines, parcels, and county boundaries for Indiana, 2021. Also includes zipped geodatabases for individual counties, state geocoder, and real property geodatabase. See inventory and metadata files for more information.
- Keyword:
- Indiana, GIS, and Spatial Data
- Citation to related publication:
- Title:
- 2021 Indiana Statewide Geospatial Data Harvest
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- Creator:
- Indiana Geographic Information Office
- Description:
- Includes geodatabase with statewide address points, street centerlines, parcels, and county boundaries for Indiana, 2022. Also includes zipped shapefiles for individual counties, state geocoder.
- Keyword:
- Indiana, GIS, and Spatial Data
- Citation to related publication:
- https://dataharvest.gio.in.gov/
- Title:
- 2022 Indiana Statewide Geospatial Data Harvest
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- Creator:
- Indiana Geographic Information Office
- Description:
- Includes geodatabase with statewide address points, street centerlines, parcels, and county boundaries for Indiana, 2023. Also includes zipped shapefiles for individual counties, state geocoder, and real property geodatabase.
- Keyword:
- Indiana, GIS, and spatial data
- Citation to related publication:
- https://dataharvest.gio.in.gov/
- Title:
- 2023 Indiana Statewide Geospatial Data Harvest
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- Creator:
- Dekydtspotter, Laurent, Miller, A. Kate, Meinert, Kent , Cha, Jih-ho, Ah, Jae-Hyun , Swanson, Kyle , and Xiong. Yanyu
- Description:
- This study addresses a debate on the nature of gamma (>30Hz) oscillations in language generation and structuring from a top-down vs. bottom-up chunking approach. Working within the framework of recent oscillatory models for syntax, we argue that a time-frequency analysis of electroencephalography at crucial points of recursions in bi-clausal wh-movement is probative of the role of gramma oscillations in the creation of referential dependencies nested into wh-dependencies, accounting for aspects of the expressive power of language. The study proposes that gamma oscillations in frontotemporal circuitry create syntax-semantics objects in contrast with slow-rhythm entrainment of gamma oscillations tracking semantic fitness in bottom-up chunking. We show gamma power effects associated with aspects of anaphoric relations established in syntax vs. discourse during the processing of bi-clausal filler-gap dependencies. Despite equal semantic fitness across conditions for noun phrase modifiers (Mods) and noun complements (Comps), Mod-Comp modulations of ERPDs linked to anaphoric relations with early vs. late antecedents arose in referential processing aligned with gap positions, suggesting the gamma-based implementation of referential relations is induced by the re-representations of pronouns in complex filler-gap dependencies.
- Keyword:
- processing, dependency, anaphora, time-frequency, language architecture, EEG
- Citation to related publication:
- Title:
- Cortical 𝛾-Oscillations Implement Basic Language Operations: Evidence from Electroencephalography in Anaphora During English Filler-gap Dependency Processing
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- Creator:
- Laughlin, Patrick M
- Description:
- Spectroscopy data were collected on a BioTek Synergy H1 plate reader, then exported to and analyzed in Excel. 3D charts used in the manuscript were generated with OriginPro. Microscopy images are in proprietary .nd2 format of Nikon Elements software. .nd2 files were opened and processed with ImageJ. Gels were imaged on a BioRad Chemidoc.
- Keyword:
- SARS-CoV-2, Nucleocapsid, N-Protein, Liquid-liquid phase separation, Coronavirus, and Virus Assembly
- Citation to related publication:
- Laughlin, P. M.; Young, K.; Gonzalez-Guiterrez, G.; Wang, J. C.-Y.,; Zlotnick, A. A narrow ratio of nucleic acid to SARS-CoV-2 N-protein enables phase separation. 2024.
- Title:
- Raw data for "A narrow ratio of nucleic acid to SARS-CoV-2 N-protein enables phase separation"
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- Creator:
- Dekydtspotter, Laurent. Miller, A. Kate. Swanson, Kyle. Cha, Jih-Ho. Xiong, Yanyu. Ahn, Jae-Hyun. Gilbert, Jane A. Pope, Decker. Iverson, Mike. Meinert, Kent .
- Description:
- We discuss event-related power differences (ERPDs) in low- and broadband-γ oscillations as the edge of embedded clauses is processed in wh-dependencies such as Which decision regarding/about him/her did Paul say that Lydie rejected without hesitation? in native and nonnative French speakers. The experimental conditions manipulated whether pronouns appeared in modifiers (Mods) or in noun complements (Comps) and whether they matched or mismatched a matrix-clause subject in gender. Across native and nonnative speakers, we found that anaphora-linked ERPDs for Mods vs. Comps in evoked power first arose in low γ and then in broadband γ. Therefore, referential elements first seem to be retrieved from working memory by narrowband processes in low-γ and then referential identification seems to be computed in broadband-γ output. Interactions between discourse- and syntax-based referential processes for the Mods vs. Comps in these ERPDs furthermore suggest that multidomain γ-range processing enables a range of elementary operations for discourse and semantic interpretation. We argue that a multidomain mechanism enabling operations conditioned by the syntactic and semantic nature of the elements processed interacts with local brain microcircuits representing features and feature sets that have been established in first- or second-language acquisition, accounting for a single language epistemology for native and nonnative language.
- Keyword:
- anaphora, movement, gamma band, time-frequency, second language
- Citation to related publication:
- Title:
- Hierarchical Neural Processing in γ Oscillations for Syntactic and Semantic Operations Accounts for First and Second Language Epistemology
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- Creator:
- Jared Lewis
- Description:
- MD simulations conducted using NAMD
- Citation to related publication:
- Title:
- fused_test
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- Creator:
- Jared C. Lewis
- Description:
- MD simulations on a POP BpyAla mutant with Ni(II) bound conducted using NAMD.
- Citation to related publication:
- Title:
- POP BpyAla Ni(II) Rep1
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- Description:
- This zip file contains WAV-audio files and annotations. The recordings were produced using a digital audio recorder (ZOOM H6) and can be listened to using any sound software that can play WAV-audio files. The annotations can be viewed and edited by the ELAN software packages. ELAN ( https://tla.mpi.nl/tools/tla-tools/elan/) is a professional tool for the creation of complex annotations of video and audio resources. Download the dataset using the link below.
- Citation to related publication:
- Title:
- Chatino Speech Corpus Archive Dataset
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- Citation to related publication:
- Title:
- Vortex II Forecast Data - forecast_20100610160000Z_run001
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- Citation to related publication:
- Title:
- Vortex II Forecast Data - forecast_20100510120000Z_run001
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- Citation to related publication:
- Title:
- Vortex II Forecast Data - forecast_20100523170000Z_run001